Thursday 26th Nov

Time	What
09:30	Speaker
10:00	RNAseq
10:45	Break
11:00	RNAseq cont.
12:15	Lunch
13:00	RNAseq cont.
14:30	Break
14:45	RNAseq cont.
16:30	End of Day

Introduction to RNAseq Analysis

Learning objectives:

• Perform quality and adapter trimming
• Align reads to a genome
• Summarise reads through counting and feature mapping
• Perform differential expression analysis
• Understand how to control for type 1 error (false positives)
• Perform overrepresentation analysis

Lesson:

Quality control of sequence data

Trimming and filtering

Mapping and Counting

Differential Expression

Overrepresentation Analysis